M13 SINGLE-STRANDED TEMPLATE
PREPARATION
-
Dilute an overnight culture of host cells (DH5a, JM101, NM522)
1:100 in 25 ml TB broth and infect with a single plaque of recombinant
M13.
-
Shake vigorously for 6 hours at 37ºC.
-
Collect the supernatant by centrifugation at 12,000 x g for
15 minutes. Pour supernatant into a fresh tube and repeat.
-
Precipitate the phage by the addition of 0.25 volumes of
phage precipitation solution and incubate on ice for 30 minutes, then centrifuge
at 12,000 x g for 15 minutes. Thoroughly drain supernatant and wipe excess
away with a Kimwipe.
-
Resuspend pellet in 400 ul TE.
-
Add 1 volume of 24:1 cholorform:isoamyl alcohol and vortex
for 1 full minute. Spin at 12,000 x g for 5 minutes.
-
Transfer the aqueous phase to another tube; leave the interface
behind. Add 1 volume of TE saturated phenol/chloroform, vortex for 1 minute,
centrifuge at 12,000 x g for 5 minutes.
-
Repeat above step until there is no longer an interface present.
-
Transfer the aqueous phase to a fresh tube and add 0.5 volumes
7.5 M ammonium acetate, pH 7.5 and 2 volumes of 100% ethanol. Mix and incubate
at -20 for 30-90 minutes.
-
Centrifuge at 12,000 x g at 4ºC for 15 minutes, rinse
the pellet with 70% ethanol and dry at bench for 3-5 minutes.
-
Resuspend the pellet in 50 µl of deionized water.
Phage precipition solution:
-
3.75 M ammonium acetate
-
20% PEG-8000
-
Add equal volumes of 40% PEG-8000 and 7% M NH4OAc, pH 7.5
-
TE-saturated phenol/chloroform
-
Mix equal parts of TE and phenol and allow the phases to
separate. Then mix 1 part of the lower, phenol phase with 1 part chloroform:isoamyl
alcohol (24:1).
Updated 01 December 2000.