INNER MEMBRANE PERMEABILITY ASSAY (ONPG ASSAY)
The b-galactosidase
activity of E. coli ML-35 measured with o-nitrophenyl-b-D-galactopyranoside
(ONPG) as substrate. E. coli
ML-35 is a lactose, permease-deficient
strain with constitutive cytoplasmic b-galactosidase activity.
REFERENCES:
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Skerlavaj, B.,
R. Domenico and R. Gennaro. 1990. Rapid permeabilization and
inhibition of vital functions of gram-negative bacteria by bactenicins.
Infect. Immun. 58: 3724-3730.
-
Lehrer, R.I.,
A. Barton, K.A. Daher, S.S.L. Harwig, T. Ganz, and M.E. Selsted. 1989.
Interaction of human defensins with Escherichia coli.
Mechanism of bactericidal activity. J. Clinical Invest.
84: 553-561.
MATERIALS:
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ONPG stock 30
mM = 9 mg/ml in dH20
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10 mM sodium phosphate
buffer (pH 7.5) containing 100 mM NaCl. (remember: to make
Na phosphate buffer...make 10 mM Na2HPO4 and 10 mM
NaH2PO4 and combine until the pH is 7.5)
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E.coli strain
ML-35
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Positive control;
Gramicidin S, 1-5 mg/ml
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Dual beam spectrophotometer;
a dual beam model is required to subtract the background activity of cells
and ONPG alone.
METHOD:
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Inoculate 100
mls of media ( LB or Mueller Hinton broth ) with overnight culture of ML-35.
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Grow up cells
to mid log phase ( OD 600 = 0.4-0.6 ). Spin down and resuspend in
above Na phosphate buffer to OD 600 = 0.5. Don’t wash cells
with extra spins. Note: cells grown to higher OD i.e. 0.9 are
still OK, but use logarithmic phase cells. Spin cells at room temperature
and don’t store on ice. You can use the “Silencer” centrifuge set at “5”
(approx. 4000
rpm) for 10 -15 minutes to spin down cells or the Sorvall floor model .
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Set the spectrophotometer
wavelength to 405 nm.
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Zero the spec
with water or buffer.
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Turn chart recorder
on, set speed to 15 mm/min, zero chart recorder. Full scale = OD 1.
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In order to “subtract”
the background during the assay, the reference cuvette in the back will
have the same amount of cells and ONPG , but using an additional amount
of buffer in place of the peptide added to the other cuvette.
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To TWO cuvettes:
Add 1/20 of ONPG stock ( 30 mM = 9 mg/ml) to cell suspension to give
a final concentration of ONPG of 1.5 mM. i.e. 760 ml of cells
and 40 ml of ONPG.
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To one cuvette
add buffer. i.e. 8 ml. Mix and place in the reference cuvette position.(Back)
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To the second
cuvette add peptide i.e. 8 ml of (100X) stock, mix and place in the
front position.
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Monitor change
in OD, usually until the OD = 1.0. Some compounds/ peptides have a long
“lag” phase, so measure for 10-15 minutes if there is little or no change
in OD.
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For each sample,
a new set of two cuvettes must be used; the back reference cuvette cannot
just be left in the back. Do not add the ONPG to the cells until you are
ready to test each sample.
Updated
June 1, 2001.